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Egon Willighagen

egonw@social.edu.nl

<p>This account is used for tooting conferences and about the Dutch academic system. Sometimes Dutch. Toots are personal and searchable. he/him</p>

Posts

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    @inchi-trust.bsky.social @BorkLab @shl @efsa.europa.eu #followFriday

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    new blog: &amp;quot;Molecular Inorganics: SMILES, MDL molfile v3000, and InChIs&amp;quot; https://doi.org/10.59350/yhf27-fp921 &amp;quot;Both use the SMILES, but not all SMILES captures all the chemistry we need. And the InChI software needs an V3000 MDL Molfile. Thanks to John and other @cdk developers, there is good support for recent cheminformatics software, but I was not sure it had what I would need.&amp;quot; Replies to this post show up in the blog. #chemistry #cheminformatics #inchi...

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    every now and then I end up in a situation where the research article will not be published under a CC-BY license. This week, six more (publisher version) papers are now freely available, from venues like a IEEE journal, a book chapter, and from the Communications of the ACM. Green #openaccess via the Dutch Taverne law. I hope the &amp;quot;free PDF&amp;quot; info spreads widely

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    Nice to see the Maastricht Day already has 100 registrations! The Heerlen Day still have spots left. I am attending both, and will bring my #meshcore device to see how things are working out in the south of Limburg.

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    @dan@discuss.systems anything known about their academic tree? https://qlever.scholia.wiki/author/Q136505436#academic-tree

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    not just for people from Heerlen and Maastricht, but also for Sittard, Venlo, Hasselt, Aachen, Liege, and even Eindhoven and Cologne! #openscience https://social.edu.nl/@oscmaastricht/116442837308397958

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    RE: https://social.edu.nl/@osflimburg/116442895420470373 I will be there for chats and networking, and and I love to talk about @tgx_um, @cdk, @blueobelisk, @wikipathways, @wikidata, @wdscholia, @bridgedb, @elixir_europe, @fair4chemnl, @vhp4safety, @biohackrxiv, @oscmaastricht, or just about #openscience in general!

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    a quick update, it works like a charm. getting many new IUPAC names this way, and it seems the 500k will be reached in about 2 weeks, which is quite amazing realizing it was around 290k 2 days ago, when it ran for about a year. (it&#39;s 332k right now) I think the difference is simply the many article JATS that come in late, and missed when doing API searches for a certain time period

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    Happy birthday, @OpenScienceNL !!!!

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    TIL there is a Dutch higher education URL shortener at https://edu.nl/

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    yeah, not quite the list that I hoped for... new blog post: &amp;quot;FAIR Implementation Profiles: Chemistry&amp;quot; https://doi.org/10.59350/x115q-m5f95 #fair #chemistry #INTOXICOM #FAIR4ChemNL &amp;quot;I have had this on my todo list for way too long: writing about FAIR Implementation Profiles, or FIPs for short&amp;quot; https://chem-bla-ics.linkedchemistry.info/2026/05/05/fair-implementation-profiles.html Replies to this post will show up in the blog

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    RE: https://social.edu.nl/@tgx_um/116492224770383433 nice work by my colleagues. Direct link to this new knowledge base: https://cnvpathwayatlas.github.io/cnv-website/

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    congrats to all .nl users!

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    @Andrawaag will people be invited to write BioHackrXiv reports? #swat4hcls

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    @Bibliothecaris @SURF ah, great to hear they are further opening their #peertube trial!

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    RE: https://social.edu.nl/@intconfchemstr/116416143010752584 excited to see the first ICCS 2025 paper online!

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    Next week Andra Waagmeester (@Andrawaag) will defend his PhD thesis on January 16 on the &amp;quot;Biological Pathway Abstractions: From Two-Dimensional Drawings to Multidimensional Linked Data&amp;quot; (https://www.maastrichtuniversity.nl/events/phd-defence-andra-sachinder-waagmeester). In the morning there will be a mini symposium (see image). Register here today: https://forms.gle/oqMbsVhurBiEQeca7 ! #wikipathways #biology #rdf #wikidata

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    interesting to see that also Journal of Cheminformatics (still not on Bluesky or Mastodon?) articles are also showing up in podcasts :) The most recent related to IP concerns: https://doi.org/10.1186/s13321-025-00982-w HT @altmetric.com #publishing #chemistry #cheminformatics

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    @Andrawaag is kicking off the #swat4hcls main symposium. yesterday was the tutorial day, but all the talks (including a short talk by me) will be today. Plz ping me if you read this and are also at SWAT4HCLS!